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flexsim

A flexible SIM reconstruction method capable to handle difficult data prone to reconstruction artifacts.

globalbioim

A unifying Matlab framework for the development of reconstruction algorithms in computational imaging

ma-tirf_reconstruction

Multi-angle total internal reflection fluorescence microscopy (MA-TIRF) reconstruction algorithm which jointly performs volume reconstruction, deconvolution, and background estimation.

optitools

sim_reconstruction

Single-slice structured illumination microscopy (SIM) reconstruction algorithm based on an inner-loop-free ADMM. This method enables the estimation of the out-of-focus signal that usually affects the reconstructions obtained from 2D acquisitions.

smlm-cel0

Single Molecule Localization Microscopy (SMLM) algorithm. It is a grid-based method which minimizes the Continuous Exact L0 functional through the Iterative Reweighted L1 algorithm