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ann-benchmarks

Benchmarks of approximate nearest neighbor libraries in Python

avalanche

bha

Brain Hierarchical Atlas package

blog

brainart

create a mosaic of brain images to match any image template

c-pac

Configurable Pipeline for the Analysis of Connectomes

college_projects

Some college courses projects (Matlab, Perl, JAVA, C...) [P2P, PARSERS/COMPILERS, ALGORITHMICS, AI, NN, VOICE PROCESSING...]

datalad.org

Website sources of datalad.org

europythonchallenge2016

This is the repo that contains the databases for the Europython Challenge 2016 proposed by Plethora

fmriprep

fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting.

global2017

webpage for Brainhack Global 2017

gsoc2016

A web application to build your blog on GitHub

irf-segmenter

Deep learning based, intraretinal fluid segmenter for macular OCTs

lab_tools

Alanine Mutagenesis Chain Replacement & Experiment Saver

mriqc

Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain

mrtrix3_connectome

Generate subject connectomes from raw image data and perform inter-subject connection density normalisation, using tools provided in the *MRtrix3* software package.

nearpy

Python framework for fast (approximated) nearest neighbour search in large, high-dimensional data sets using different locality-sensitive hashes.

neuro_docker

A Dockerfile to create a Ubuntu docker for neuroimaging

neurovault

Easy to use web database for statistical maps.

neurovault_benchmark

Benchmarking of different multidimensional data searching engines for Neurovault images

neurovault_data

Installation data and other files for NeuroVault.

nhw17_test

Testing env

nilearn

Machine learning for NeuroImaging in Python

niworkflows

Common workflows for MRI (anatomical, functional, diffusion, etc)

py_vb_toolbox

Vogt-Bailey index toolbox in Python

pybraincompare

brain image comparison and visualization methods for python!

pypes

Reusable neuroimaging pipelines using nipype

pypreprocess

Preprocessing scripts for neuro imaging

seattle-perceptual-learning

Perceptual learning experiments

shablona

A template for small scientific python projects