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Name: Eljas Roellin
Type: User
Company: Helmholtz Munich
Bio: bioinformatics
Eljas Roellin's Projects
anndata
Annotated data.
cellrank
CellRank: dynamics from multi-view single-cell data. See the docs:
comp
CoMP: Contrastive Mixture of Posteriors
ehrapy
Electronic Health Record Analysis with Python.
ehrapy-tutorials
Tutorials for ehrapy
geneticrelatedness
imbalanced-learn
A Python Package to Tackle the Curse of Imbalanced Datasets in Machine Learning
mudata
Multimodal Data (.h5mu) implementation for Python
muon-tutorials
Tutorials for multimodal omics data analysis
pathomicfusion
Fusing Histology and Genomics via Deep Learning - IEEE TMI
pertpy
Perturbation Analysis in the scverse ecosystem.
pertpy-tutorials
sars-cov2-neumeldungen-der-kantone
Einfache Graphische Darstellung der neugemeldeten SARS-COV2 Infektionen der Kantone
scanpy
Single-cell analysis in Python. Scales to >1M cells.
scimb
sctab
scverse-tutorials
Tutorials for learning scverse
scvi-tools
Deep probabilistic analysis of single-cell omics data
simbsig
The official implementation for the SIMBSIG package
simpletool
single-cell-best-practices
https://www.sc-best-practices.org
squidpy
Spatial Single Cell Analysis in Python
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