Name: Emilyn Costa Conceição
Type: User
Company: Stellenbosch University
Bio: As a Biologist with a PhD in Microbiology, I'm fascinated by Mycobacteria. My research focuses on Molecular Epidemiology using WGS and bioinformatics tools. =)
Twitter: emilyncosta
Location: Cape Town, South Africa
academic-cv
cpqgmfiocruzba_mtb_mdr-xdr_nf
crisprbuilder-tb
Reconstruct M.tuberculosis CRISPR locus from WGS data
cryptic-ecoffs
Data and code to reproduce the figures and tables in the CRyPTIC ECOFF/ECV paper
deeplexicondemuxandsplit
Wrapper pipeline script running demux and split on nanopore fast5 and fastq data using the Deeplexicon pipeline
eccs_website
My Blog and CV
ena-download-and-spotyping
iec-pa_figures_phdemilyn
Isolates images from PDF for publication in journals.
iec-pa_mtb-l1_phylogeny_phdemilyn_nf
labbact-ini-fiocruzrj_mtb_monoinh_nf
labmam-fiocruzrj_legionella_nf
labmam-fiocruzrj_mbovis_bcg_nf
labmam-fiocruzrj_mbovis_mscluiz_nf
labmam-fiocruzrj_mbovishuman_nf
labmam-fiocruzrj_mtb_eldholm
Eldholm genomes
lineage_1_malawi_nf
mtbseq_source
MTBseq is an automated pipeline for mapping, variant calling and detection of resistance mediating and phylogenetic variants from illumina whole genome sequence data of Mycobacterium tuberculosis complex isolates.
mtc
Python package to annotate WGS genomes of tuberculosis and get information about their CRISPR
ncbi_submission_upload_genomes_via_ftp
snippy
tbvcfreport
Generate an interactive HTML-based report from M.tb SnpEff annotated VCF(s)
transflow
A snakemake workflow for WGS-based tuberculosis transmission analysis
transphylo
Reconstruction of transmission trees using genomic data
ufrj_public_phdemilyn
Für Emilyn
unifesp_ntm_newspecies-nf
Paper "Description of new species of Mycobacterium terrae complex isolated from sewage at the São Paulo Zoological Park Foundation in Brazil"
usp-rp_mtb_prison_sp_nf
Tb-Profiler analysis in AWS Batch
usp-rp_rdanalyzer_phdeva
wgs_lineage_1_resistance
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
