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Florian Eggenhofer's Projects

bio-viennangs icon bio-viennangs

A Perl extension and collection of utilities for Next-Generation Sequencing (NGS) data analysis

biobasehttp icon biobasehttp

Haskell cabal libary for submission and result retrieval from the NCBI Entrez REST webservice

biobasexna icon biobasexna

efficient encoding of short RNA and DNA sequences

biohmm icon biohmm

Libary containing parsing and visualisation functions and datastructures for Hidden Markov Models in HMMER3 format.

blasthttp icon blasthttp

Haskell cabal libary for submission and result retrieval from the NCBI Blast REST webservice

cmv icon cmv

Visualize HMMs, CMs and their comparisons

coprarna icon coprarna

Target prediction for prokaryotic trans-acting small RNAs

formalgrammars icon formalgrammars

Context-free and linear grammars in Haskell (parsing, pretty-printing, embedded DSL)

forna icon forna

Create force-directed graphs of RNA secondary structures.

galaxy icon galaxy

Data intensive science for everyone.

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