Comments (3)
donovan-h-parks
commented on August 16, 2024
Hey Connor,
Can you check to see if the offending file actually exists:
/export/data1/db/checkm/genome_tree/genome_tree_prok.refpkg/genome_tree.derep.log
You should be able to fix the problem manually be downloading the latest CheckM data from:
https://data.ace.uq.edu.au/public/CheckM_databases/checkm_data_16012015_v0.9.7.tar.gz
Just decompress it and point CheckM to the new directory with checkm data setRoot.
Cheers,
Donovan
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ctSkennerton
commented on August 16, 2024
The whole directory genome_tree_prok.refpkg doesn't exist, I'll try the manual download
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ctSkennerton
commented on August 16, 2024
Yo, manual download seemed to work
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Related Issues (20)
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