Comments (8)
@pioja-dtu I think I found some good results but could you please review my methodology to ensure my findings are correct? Give me a thump up 👍 if my methodology is correct so I can create a PR.
Results
Column 27
This is Ewe-Ece/V
which is described as E we -E ce : WE versus CE potential
in the manual. The values seem to be 32 bit floats. It is currently not included in in the galvani.BioLogic.VMPdata_colID_dtype_map
dictionary.
Column 174
This is <Ewe>/V
which is described as <E we> : averaged voltage (WE vs. REF)
in the manual. The values seem to be 32 bit floats. However, there is already a record named <Ewe>/V
in the galvani.BioLogic.VMPdata_colID_dtype_map
dictionary under the key 77
. PM me if you need a the file pair.
Methodology
I used EC-Lab 11.36 to generate an .mpt
file from my .mpr
file. I then fetched the column name after the one mentioned in the error message from the .mpt
file.
from galvani.
Hello and sorry for not responding for so long. If your data are not secret, please could you provide me with a .mpr file that triggers this problem and a corresponding .mpt file produced by loading the same data in the BioLogic software and exporting?
from galvani.
If you cannot provide me with the raw data, then please do the same process of exporting the .mpt file, then open the .mpt file in a text editor, look for the column headers and tell me which one comes after "control/mA".
from galvani.
Hello, thanks for your reply and sorry for no answering - not so often here...
I noticed similar error when trying to load data when the measurement also records some input from external devices (IN 1 and IN 2).
Please see the attached filles for both cases.
Would be really cool if that could be implemented in next version of galvani.
biologic files.zip
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Any progress on this issue? I have a similar problem:
NotImplementedError: Column ID 174 after column control/mA is unknown
I will have a closer look at the problem myself. Maybe I can open a PR.
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I find that Column 174 was already added in c1e5d92 but this commit is not yet included in a release. I guess my methodology is correct then...
from galvani.
Your descriptions look correct to me!
from galvani.
I also had unrecognized columns when using the latest release but not when using the development code.
@echemdata @chatcannon is a new release planned?
Thanks for the very useful piece of software!
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Related Issues (20)
- CI is using up too much git-lfs bandwidth HOT 4
- Read Arbin files without writing temporary database
- Column 16/17 are not readable - `Analog IN 1/V`
- BioLogic: Unexpected end of file while reading data current module: b'VMP settings HOT 1
- NotImplementedError: Column ID 174 after column time/s is unknown HOT 2
- Use contextmanagers to ensure files are closed on errors
- Add a release checklist HOT 2
- Column ID 175, 176, 177, 182, 215, 475, 478, 481, 503 unknown HOT 5
- how to find Dtype for unknown columns ? HOT 1
- more of a question than an issue, i am not seeing all of the columns that are in the data set in the output of the biologic.mprfile data HOT 5
- parse file header HOT 1
- column 23 has wrong label HOT 2
- column 6 has wrong label HOT 1
- column 11 has wrong label
- Incompatibility with EC-Lab>=11.50 - BioLogic.MPRfile issue HOT 27
- Unable to read res files with mdbtools>=1.0 HOT 3
- Maintenance status + sustainability HOT 10
- Something to cite HOT 2
- OSError: Unexpected end of file while reading data might due incompatibility with EC-lab 11.50 HOT 1
- [sugestion] Get more precise start date without log module HOT 3
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