Eachan Johnson's Projects
Microbial fitness inference from barcode counts.
Count barcodes in FASTQ files
Boilerplate for Chemical Genomics of Tuberculosis project
Molecular Processing Made Easy.
A Python frontend to the LigPlot+ program, allowing batch processing of Protein Data Bank (PDB) files through the DIMPLOT algorithm.
Graceful error handling in R
Fast demultiplexing of Illumina FASTQ files using Python.
One word answer to the question
Framework to turn all your random data files and emails into an HTML lab notebook
Dotty visualization of Boston's MBTA public transportation system using d3.js
Personal R package
Python library for getting (bio)chemical data from web-based APIs
Framework for building in-browser data-based presentations
Snakemake profile to execute workflows on the Broad Institute UGER cluster
Tools for handling Unique Molecular Identifiers in NGS data sets
Python script for extracting Protein Data Bank (PDB) files from a PyMOL session (PSE) file.
Turns cumbersome Molecular Devices Spectramax Softmax data files into a usable tidy CSV
Pipeline construction and execution in R