deyi-wangg Goto Github PK

bio-info-docs

Documentation about bioinformatics at Naturalis

delta_statistic

Codes for calculating delta, a phylogenetic analog of the Shannon entropy for measuring the degree of phylogenetic signal between a categorical trait and a phylogeny.

ggtree

:christmas_tree:Visualization and annotation of phylogenetic trees

mpcmarchive

Archive of Online Practical Materials for the book of Modern Phylogenetic Comparative Methods (ed. Garamszegi, 2014)

multivariate-mixed-models-in-r

contains R scripts exemplifying use of multivariate mixed models in a variety of R packages.

murders

creating a remote repo and connect with local repo

my_first_repo

My first Github repo

openstack-docs

Documentation resources IT facilities Naturalis

phyloint

phylosymbiosis

Data and Scripts for Phylosymbiosis

ratematrix

Bayesian estimation of the evolutionary rate matrix.

rtdt

Simulated datasets used in the RTDT article and example input files for conducting analyses using different tip-dating method.

swarm

A robust and fast clustering method for amplicon-based studies

tex-workshop

Material related to a TeX workshop/lunch meeting.

trait-geo-diverse-ungulates

Comparative analysis of abiotic niches in Ungulates

treedater

Scalable relaxed clock phylogenetic dating

vsearch

Versatile open-source tool for metagenomics

workshop_maxent_r

a brief tutorial on running Maxent in R