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type="sum" for bw.stats() about pybigwig HOT 3 CLOSED

deeptools avatar deeptools commented on July 17, 2024
type="sum" for bw.stats()

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Comments (3)

dpryan79 avatar dpryan79 commented on July 17, 2024

@tturowski I'm looking into implementing this now. Am I correct in assuming that you'd want it to produce the sum of the per-base values?

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tturowski avatar tturowski commented on July 17, 2024

yes - something what would replace:
sum(bw.values(gene_name, 0, length))

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dpryan79 avatar dpryan79 commented on July 17, 2024

This is now implemented for the next release, which will come out once I get more details on #56

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