Comments (1)
or have a look at the advanced scientific data format, also works like a charm.
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Related Issues (20)
- Allowing weights for VAMP dimensionality reduction HOT 6
- Error importing deeptime with scikit-learn 1.2.0 HOT 4
- About applying Deeptime to molecular dynamics simulation trajectories on protien HOT 3
- Handling parallel simulations HOT 1
- Implied timescales from deeptime.decomposition.TICA HOT 2
- [Bug] At least one of the given states is not contained in this model HOT 2
- VAMPnet gives highly fluctuating score results HOT 1
- Bayesian Markov models give different MFPT
- How to compute any actual quantity of the coarse-grained kinetics with employing the fuzzy memberships? HOT 7
- Installation without conda and pip HOT 3
- Which version of VAMPNets is there? HOT 1
- deeptime cannot be installed on Mac computers with Apple Silicon and Python 3.12.0. HOT 4
- Does one need identical features to compare between related systems? HOT 4
- Example/tutorial for dealing with MD trajectories HOT 1
- Applying TICA to ragged feature vectors HOT 2
- Cross Validation score for MaximumLikelihoodMSMs and BayesianMSMs HOT 2
- KoopmanWeightingEstimator partial_fit method throws ValueError HOT 2
- Regarding trajectory data HOT 2
- Extracting pdb structures HOT 2
- restrict_to_submodel in TRAMDataset
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