deeprob Goto Github PK
Name: Deepro Banerjee
Type: User
Company: Penn State
Bio: PhD Candidate at Penn State | Bioinformatics; Deep Learning; Human Genetics | M.S. from Carnegie Mellon
Twitter: DeeproBanerjee
Location: State College
Name: Deepro Banerjee
Type: User
Company: Penn State
Bio: PhD Candidate at Penn State | Bioinformatics; Deep Learning; Human Genetics | M.S. from Carnegie Mellon
Twitter: DeeproBanerjee
Location: State College
Codebase for manuscript titled "Distinct variant classes differentially contribute to specific phenotypes of neurodevelopmentaldisorders"
Cell type specific enhancer-gene predictions using ABC model (Fulco, Nasser et al, Nature Genetics 2019)
Girirajan Lab: Beginners guide to bioinformatics
Unessay1 assigment for Biol-460 PSU Course
UNESSAY2 assignment for PSU BIOL-460 course
Peak classification with Deep Learning
Biostar Q&A
Check go term and kegg enrichment for multiple genes regulating bmi
Introduction to data driven life sciences
A Hybrid Glycosylation Model for Monoclonal Antibodies in Chinese Hamster Ovary Cell Lines
Computing tips for scientists
Codebase for the domain adaptation (cross-species TF binding prediction) project.
Cross-species TF binding prediction
Enzyme and Protein Classification/Functional annotation model using primary sequence
Code for the paper "Enzyme Promiscuity Prediction using hierarchy-informed multi-label classification"
Course syllabus, notes, and descriptions for the CMU 06-625 course
Gene Microarray Expression Data Analysis from Raw to Processed
Girirajan Lab VCF file annotation pipeline
A Gene Regulatory Network of Cyanothece sp. 51142 created from literature sources
Differential patterns in gene expression and chromatin accessibility during hemopoiesis
A python tool for numerically encoding protein sequences based on physicochemical properties
iFeature is a comprehensive Python-based toolkit for generating various numerical feature representation schemes from protein or peptide sequences. iFeature is capable of calculating and extracting a wide spectrum of 18 major sequence encoding schemes that encompass 53 different types of feature descriptors. Furthermore, iFeature also integrates five kinds of frequently used feature clustering algorithms, four feature selection algorithms and three dimensionality reduction algorithms.
Journal club presentations
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.