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Wei Li's Projects

awesome-crispr icon awesome-crispr

List of software/websites/databases/other stuff for genome engineering

awesome-single-cell icon awesome-single-cell

List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.

lab_2020 icon lab_2020

Repository for all labs for STAT115 for 2020

mageck icon mageck

Experimental source code for MAGeCK (Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout)

mageck2 icon mageck2

A next generation of CRISPR screening analysis tool

ngstools icon ngstools

Scripts and tools for Next Generation Sequencing

ps icon ps

Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights in single-cell perturbation datasets.

rnaseqreadsimulator icon rnaseqreadsimulator

RNASeqReadSimulator is a simple tool to generate simulated single-end or paired-end RNA-Seq reads.

skytree icon skytree

Source codes for building glioma evolutionary trees from SKY data

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