davidhildebrand Goto Github PK

autoencoded-vocal-analysis

Learn acoustic features with variational autoencoders

beautiful-jekyll

✨ Build a beautiful and simple website in literally minutes. Demo at https://beautifuljekyll.com

bigwarp

A tool for manual pointwise deformable registration using bigdataviewer.

caiman

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

caiman-matlab

Complete Matlab pipeline for large scale calcium imaging data analysis

catmaid

Collaborative Annotation Toolkit for Massive Amounts of Image Data

catmaid_tools

Tools for accessing data from a catmaid server

ccn_caiman_mesmerize_workshop_2023

Repo for CCN workshop on caiman and mesmerize in January 2023

chkshared

comando

Arduino-python communication and command library

cryptoetf

Portfolio Overview Tool for Your CryptoCoin Capitalization-Weighted Portfolio.

deep_marching_cubes

Code for "Deep Marching Cubes: Learning Explicit Surface Representations", CVPR 2018

eyeloop

EyeLoop is a Python 3-based eye-tracker tailored specifically to dynamic, closed-loop experiments on consumer-grade hardware.

fiji

Fiji Is Just ImageJ

flif

Free Lossless Image Format

flifcrush

simple lossless crusher tries to reduce FLIFs in size by recompressing them with different parameters

fluffy-goggles

gt_pickup_annotation

Annotate relative position of section to slot from staining/pickup images

hildebrand16

hildebrand16_web

isi

Code for ISI image acquisition, stimulus presentation, and mouse visual area segmentation.

joy_vis

This is a simple audio visualiser, written using Processing (https://processing.org) It aims to emulate the classic Joy Division 'Unknown Pleasures' album cover art.

maripets

mattermost-server

Open source Slack-alternative in Golang and React - Mattermost

mesmerize-core

High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn

miscellaneous

Miscellaneous scripts and tools

mkturk

Wireless touchscreen behavioral training

multicamselfcal

multiple camera self calibration Toolbox

neurodata.io

Meteor-driven public website

normxcorr2-python

Python 3.5 implementation of Matlab's normxcorr2 using scipy's fftconvolve and numpy.