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azure-quickstart-templates

Azure Quickstart Templates

bioconda-recipes

Conda recipes for the bioconda channel.

compbio-fmach.github.io

correlation

Correlation measures

cwave

Continous Wavelet Transform (CWT) library

davidealbanese.github.io

docker-builds

:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics

fastani

Fast Whole-Genome Similarity (ANI) Estimation

gtdbtk

GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.

just-the-docs

A modern, high customizable, responsive Jekyll theme for documention with built-in search.

mag-illumina

Metagenomic Assembled Genomes from Illumina sequences

mlb2017

Machine Learning for Biologists

multiqc

Aggregate results from bioinformatics analyses across many samples into a single report.

nf-example

nf-hello

nf-mag

patterns

A curated collections of Nextflow implementation patterns -- http://nextflow-io.github.io/patterns/index.html

phyloseq

phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:

prok-pan

Pangenome analysis from prokaryotic isolates

prusaslicer-settings

Prusa3D specific settings for the Slic3r Prusa Edition

snippets

snippy

spades

SPAdes Genome Assembler

templatesession

A template for creating new sessions

vsearch

Versatile open-source tool for metagenomics