darachm Goto Github PK

2018-10-32-test-uni

assemblybypacbio

Scripts to assign a barcode to a variable region from PacBio SMRT reads

barnone

Match barcodes in sequencing data based on Levenshtein distance

barnone-singularity

This is just packaging up the BarNone program for prosperity's sake, and as an exercise

bartender-1.1

This bartender version could handle arbitrary length of barcode

bartender_munge

bioinfmunger

An example GitHub Action (CI) to build a Singularity container

bioinformatics-one-liners

my collection of bioinformatics one liners that is useful in my day-to-day work

bookwyrm-doi

Social reading and reviewing, decentralized with ActivityPub

chreod

containers

containers2

metarepo for tidying up container recipes, currently Singularity

dissertation

dki

This just slurps James DeKorne's iching website into scriptable presentation of the fun bits

dll-r

DLL2021 R workshop - info, slides, Rmd, notes

docker-tuleap-aio

Build containers to run Tuleap

donor_gen

It makes donor plasmid cells from annotated gene fragments.

end-of-now

fake-headline

demo of misleading headline parsed

farbar

fiddling_about

fiddling_about_with_social_media

fitseq

flow

Scripts for processing flow cytometry and FACS data

freebarcodes

FREE Divergence Error-Correcting DNA Barcodes

germline

A toolbox of scripts to be thrown into the whirling morass of "use"

goenrich

GO enrichment with python -- pandas meets networkx

google-research

Google Research

guppy_parameter_optimiser

A small bash script that automates sweeping Guppy parameters in an attempt to optimise basecalling rate

hugo-xmin

eXtremely Minimal Hugo theme: about 150 lines of code in total, including HTML and CSS