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best-readme-template

An awesome README template to jumpstart your projects!

biomedical

Tools for curating biomedical training data for large-scale language modeling

camos

CaMOS, a GUI for analysis of multimodal neuroscience datasets.

cellmodeller

GPU-accelerated multicellular modelling framework

chromo

ChroMo, shiny application for analysis of Chromosome Movements

complupcr

A software to create, manage, and track biological samples

decu

Fluorescence microscopy deconvolution scripts, using CUDA. DeltaVision and Zeiss Spinning-Disk formats supported.

dlperl

DLPerl is a tool for DNA sequence analysis that gives information about GC, N content, motif presence and location, from FASTA files.

githubgraduation-2022

Join the GitHub Graduation Yearbook and "walk the stage" on June 11.

napari

napari: a fast, interactive, multi-dimensional image viewer for python

ndtw

Dynamic Time Warping (DTW) algorithm implementation for .NET C#

nebis

openst

Open-ST: profile and analyze tissue transcriptomes in 3D with high resolution in your lab

setquence

Encoding biological sequence sets with Language Models

sga-analysis-tools

Set of tools and scripts for automated SGA Analysis

spacemake

stim

Library for managing, storage, viewing, and working with spatial transcriptomics data using Imglib2, N5, BigDataViewer and Fiji.

stimwrap

stms-exercises

Exercises for the course "Spatiotemporal Modeling and Simulation", TU Dresden

tifffile

Read and write TIFF files. Forked from https://pypi.org/project/tifffile

tronos

Tronos: TRacking of Nuclear OScillations