Dan Allan's Projects
A pure python implementation of Crocker-Grier for single particle tracking
performance benchmarks for trackpy
sample images, examples, and speed tests for trackpy
A lightweight Traits like module
Get travis build logs, parse py.test output, and run vimdiff on failures
Tutorial on "Efficient Python for High-Performance Computing"
Python bindings to FFmpeg
Collection of quick and dirty visualization tools and widgets
VisTrails is an open-source data analysis and visualization tool. It provides a comprehensive provenance infrastructure that maintains detailed history information about the steps followed and data derived in the course of an exploratory task: VisTrails maintains provenance of data products, of the computational processes that derive these products and their executions.
A jupyter hub service for sharing voila powered dashboards inside
Python package for browsing and managing data lakes
for project-wide issues and documentation of the web-monitoring project
Website Monitoring project: a more automated version of page monitoring with Versionista (proof of concept for now)
Website Monitoring project: data processing, PageFreezer integration, and (eventually) diff filtering and processing
CLI tools & data management protocols for interacting with Page Freezer
static, persistent widgets backed by a sqlite db
tracking the orientation of a wire at the Leheny lab
Gordon's Arduino wiring-like WiringPi Library for the Raspberry Pi (Unofficial Mirror for WiringPi bindings)
N-D labeled arrays and datasets in Python
File format specification for single-scan XAS data files and data from related technique.
Geometric corrections of measurement data in tomography
Xi-cam is a graphical environment for synchrotron data analysis, management, and visualization developed by the Advanced Light Source at Lawrence Berkeley National Laboratory. This is a cross-platform open-source Python project licensed under BSD.
An extensible platform for synchrotron data reduction, visualization, and management.