Comments (3)
khembach
commented on May 27, 2024
We cannot use the rule softwareversions to print the R version, because we removed R from the environment. The solution could be to include the R version in the output from the rule listpackages.
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csoneson
commented on May 27, 2024
Yes, seems reasonable - we anyway parse the .Rout files to list the packages.
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csoneson
commented on May 27, 2024
Fixed and merged with 25de715
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Related Issues (20)
- Error running example files HOT 3
- issue when setting up and running the example data HOT 5
- Iteration over edgeR fails upon changes to metadata.txt HOT 4
- Issues Running Example Dataset HOT 2
- column-spillover in DGE result .txt file HOT 2
- Update wiki Home page command HOT 1
- Detailed instructions for MacOS installation? HOT 4
- Could not install R packages HOT 6
- Apparently stuck when running the example data set HOT 3
- CalledProcessError in EdgeR HOT 5
- Input exception wit SE reads HOT 10
- New commit breaks conda activation? HOT 12
- tximeta error HOT 1
- error in rule bigwig HOT 4
- About threads/cores HOT 3
- Error when running the example dataset HOT 7
- Gencode / Ensembl HOT 5
- trouble with running the example dataset HOT 4
- Error when using bacterial fa and gtf file in ARMOR HOT 26
- trouble running the pipeline for a bacterial species HOT 13
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