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acca

A tool for statistical assessment of categorical causal assertions, viz. state A seems to cause state B.

ath-genes

aws-examples

Notes and snippets for working with AWS

biblioteca

bpgen

C-scrap class providing a binary partition generator.

bspmap

C-scrap class for coordinate/index mappers for block sparse matrices.

cbuf

C-scrap class providing getc and ungetc on a character string. Nothing auspicious, simply handy.

charbuffer

A C scrap for managing a simple buffer of chars.

compbio

Sundry reusable scraps of C for computational biology

compbio-examples

conda-env-builders

Helpers to create Conda environments.

constats

Tools for evaluating RNA-seq assemblies

crowja.github.io

cskelgengen

Generates skeleton generators for C projects.

cstrm

C-scrap class providing something like a character stream based on a string.

csvreader

C-scrap class for reading CSV files.

ctoolset-starter

Template to help start a C toolset package.

dequeue

C-scrap class providing a double-ended queue ADT.

descstats1d

C-scrap utilities for descriptive statistics of 1d data.

dotfiles

Personal dotfiles.

fah

Helpers for working with files in FASTA format

fareader

C-scrap class for reading a file or stream of sequences in FASTA format.

fqreader

C-scrap class for reading a file or stream of sequences in FASTQ format.

fqutils

Toolset for bioinformatics people working with files in FASTQ format.

grh

Helpers for working with graphs.

hashtab

C-scrap class providing a hash table.

hichip

HiChiP QC and data analysis

hichip-workflows

hodgepodge

A collection of C-scrap utilities.

hpc-examples

HPC snippets and scripts.