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Crhistian Cardona photo

crhisto Goto Github PK

followers: 2.0 following: 1.0 repos: 10.0 gists: 0.0

Name: Crhistian Cardona

Type: User

Company: Tübingen University

Bio: Ph.D. Researcher, ML and Computational Epigenomics IMPRS-IS, Cyber Valley, Tübingen University | Dundee University

Twitter: crhistocardona

Location: Tübingen, Germany

Crhistian Cardona's Projects

biobase icon biobase

Biobase repository: https://github.com/Bioconductor/Biobase with support for sparse matrix

decoflex icon decoflex

DecoFlex deconvolution method for Omic data implemented as DecoFlexR

medecom icon medecom

Decomposition of heterogeneous DNA methylomes

music icon music

Multi-subject Single Cell Deconvolution

nmmflex icon nmmflex

Implementation of the Non-negative Multiple Matrix Factorization (NMMF) algorithm proposed in Takeuchi et al, 2013 with some modifications. There is a python native version NMMFlexPy and a R wrapper NMMFlexR

scdc icon scdc

SCDC project, originally on: https://github.com/meichendong/SCDC. Support sparse matrix among other additions.

thymus_npm-alk_notebook icon thymus_npm-alk_notebook

R Notebook with scripts for running the deconvolution of thymus bulk data identifying T-cell proportions

xbioc icon xbioc

Project xbioc originally on: https://github.com/renozao/xbioc with support for sparse matrix

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