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json

JSON for Modern C++

kimimaro

TEASAR derived skeletonization of 3D densely labeled images.

kornia

Open Source Differentiable Computer Vision Library for PyTorch

lazyflow

lazy parallel ondemand zero copy numpy array data flows with caching and dirty propagation

livecell

lp_mp

Solving LPs with convergent message passing

machine_learning

Repo for machine learning project.

malis

MALIS structured loss function for supervised learning of segmentation and clustering

map_3dvolume

Super-Fast mAP evaluation for large 3D volumes, Visual Computing Group at Harvard University

marray

Fast Runtime-Flexible Multi-dimensional Arrays and Views for C++

marray_benchmarks

Benchmarking c++ multiarrays

mc_luigi

Multicut workflow for processing large-scale connectomics data, using luigi for pipelining.

mc_solver_tests

minitorch

Lightweight torch wrapper for bio-medical segmentation

mobie-viewer-fiji

mobie_utils-feedstock

A conda-smithy repository for mobie_utils.

mulastik

Ilastik mutex watershed prototype

mutex-watershed

The mutex watershed for image segmentation

n5

Not HDF5

napari

napari: a Qt- and VisPy-based ndarray visualization tool

napari-ome-zarr

A reader for zarr backed OME-NGFF images

neurometrics

Bundling different metrics for evaluation of Neurosegmentation

neuroworks

Neural network babysteps with tensorflow

ngff

Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.

nifty

nifty cPP and Python

nifty-feedstock

A conda-smithy repository for nifty.

nifty-rag-wrapper

Wrapping the nifty rag to ilastik

ome-zarr-py

Experimental implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.

opengm

A C++ Library for Discrete Graphical Models

paintera