Comments (2)
You can resolve this issue by updating to the latest Cactus release
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The latest release (v2.8.2) works as I expected and thank you for your kindly reply! @glennhickey
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Related Issues (20)
- maybe the "path" do not exist in the gfa ?
- Large variation in run time and data recovery of cactus-hal2maf when switching reference genomes HOT 1
- Cactus-pangenome fails at make_vcf step only on real data HOT 3
- create phylogenetic tree with the alignment maf format HOT 7
- Multiple fasta input, single sample in vcf HOT 2
- Long Running Time and High Memory Consumption for `paffy` in `cactus-blast` HOT 8
- hal2fasta coordinates not matching with input HOT 1
- run on the grid_engine cluster HOT 1
- I want to know how cactus-pangenome adds tree file relationships. HOT 1
- MC process evolution tree file problem HOT 2
- Can this graph coverage be considered normal or good? HOT 2
- How compare mapping performance using vg-giraffe between pangenome and genomes used in pangenome construction HOT 1
- The sentence below, should`cactus-graphmap-join`be`cactus-pangenome`?
- Help parameterizing seqfile HOT 1
- Obtain node PAV, ID and fasta.
- unrecognized arguments: --bigChain HOT 1
- error cactus-align HOT 1
- unrecognized arguments: --maskAlpha HOT 4
- How to obtain the evolutionary order of root during merge hal file HOT 1
- Alt nodes
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