Related Issues (20)
- GWAS demo run 1 is not working HOT 1
- gwas.py is sensitive to position of IID column in phenotype's dictionary file HOT 1
- `CONTRIBUTING` docs lacks "Writing docstrings" instructions
- Regenie throws error for step1 if there are more than 1M variants HOT 6
- `ldpred2.R`: bus error HOT 4
- Allow additional options for gwas.py
- `r.sif`: Rstudio-server docs
- `gwas.sif`: build regenie with `HAS_BOOST_IOSTREAM=1`
- Push to Docker registries
- `LDpred2`: Crash with characters and integers in chromosome column HOT 1
- `singularity`: push built container to https://ghcr.io
- `LDpred2`: LD estimation with physical position instead of genetic distance HOT 1
- Subscript out of bound HOT 4
- `ldpred2.R`: add argument to drop SNPs.
- Wrong Docker build target
- search and replace `r`
- Python code with `from scipy import stats` fails w. `GLIBCXX_3.4.30 not found`
- Spawn container instances in the background
- `python3; r`: add missing modules
- buggered ldak download
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