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Chris Churas's Projects

cookiecutter icon cookiecutter

A command-line utility that creates projects from cookiecutters (project templates). E.g. Python package projects, jQuery plugin projects.

cxmate icon cxmate

A RESTFUL network API proxy service for CX

cy-net-share icon cy-net-share

A simple web application to share network files generated with Cytoscape.

cytosnap icon cytosnap

A Node.js package that renders images of Cytoscape.js graphs on the server using Puppeteer

ddot icon ddot

Toolkit for constructing, analyzing, and visualizing data-driven ontologies

hdf5oct icon hdf5oct

A library for reading and writing hdf5 files with GNU Octave

hidef icon hidef

HiDeF (Hierarchical community Decoding Framework)

infomap icon infomap

Multi-level network clustering based on the Map equation

jupyter-bridge icon jupyter-bridge

Bridge enables Jupyter code on remote server to execute HTTP calls on local PC

naked-singularity icon naked-singularity

A repository of definition files for bootstrapping Singularity containers around the software applications, frameworks, and libraries you need to run on high-performance computing systems.

py4cytoscape icon py4cytoscape

Python library for calling Cytoscape Automation via CyREST

pyimod icon pyimod

A set of Python classes that enable the manipulation of IMOD model files.

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