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alignment_zebrafish

A jupyter notebook to help align slices acquired from MALDI imaging to a reference (manual alignment, using ipywidgets, or semi-automated registration, with itk-elastix).

analysis_filling_scheme

brainmap

Allen Brain Atlas utilities, parsers and data structures

brainrender

a python based software for visualization of neuroanatomical and morphological data.

build_collider

cals2xmask

Tools to create a Xmask config file at a given timestamp from NXCALS

circadian-zonation

Code for the project: Space-time logic of liver gene expression at sublobular scale

colasdroin

colasdroin.github.io

My personal page, built with React, Mantine and P5.js

collider-dashboard

A Dash application to visualize the observables and parameters of a collider built and configured with Xsuite.

collider_check

A small package that provides functions to check the observables in a collider, using a collider built with Xsuite.

comparison_pymask_xmask

An exhaustive comparison of pymask and xmask, to ensure machines built with both collider configuration managers are identical.

couplinghmm

Project code: Low-dimensional Dynamics of Two Coupled Biological Oscillators (Nature Physics paper)

czviz

A Python Dash application to explore rhythmic circadian zonation data.

czviz-webpage

A small webpage to host the CZViz Python Dash app

d3-fourier

Fourier animation with D3.js

da_ipac_2024

Code repository for the article "Status of beam-beam studies for the high-luminosity LHC" by C. Droin & al., published in the proceedings of the 2024 International Particle Accelerator Conference (IPAC'24).

da_parametrization_run_4

da_study

A repository used for dynamic aperture simulations of the High-Luminosity LHC

da_study_for_bologna_cluster

A repository used for dynamic aperture simulations of the High-Luminosity LHC, adapted for the High Performance Computing clusters at INFN-CNAF

da_study_template

Dynamics aperture study template

dash-slicer

A volume slicer for Dash

hllhc13

jupyter-notebooks

A list of notebooks corresponding to the posts made on my blog.

lbae

The Lipid Brain Atlas Explorer is a Python Dash web-application developed to assist the inspection and the analysis of a large mass-spectrometry dataset of lipids brain distribution.

lhc_dash

A small Python Dash app to interactively explore the LHC layout.

lie_transformation

Small Python module to generate the Hamiltonian for a given multipole order, and find the Lie transformation accordingly.

minimal_qrcode_example

phaseinferencereview

Julia implementation of different methods used for phase inference

plot_dl2