Comments (4)
Can you please upload a zip containing your data so I can do some testing.
It looks like imagmagick's version updates in the VM have changed the underlying heuristics and I'll need to play to figure out how to make it work.
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Thanks, can I have the raw input stats files too?
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long since sorted.
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Related Issues (16)
- Beware hard-coded paths
- Image-weighting in antsRegistration and antsRegistration_affine_SyN.sh HOT 1
- Relax restrictions on --mask-extract
- Implement mask-extract for multispectral
- Change NOMASK to NO_MASK_INTENDED_THIS_IS_NOT_AN_ERROR
- Issue parsing columns with commas HOT 1
- Error using multispectral registration HOT 1
- Fix unspecified weights in SyN of antsRegistration_affine_SyN.sh
- Use vertstats_math instead of bc for civet masking.
- Allow for individual control of similarity metrics for image pairs
- Question: min and max for `ants_generate_iterations.py` HOT 2
- Feature update and merge create_civet_image.sh and create_morpho_image.sh HOT 3
- Rigid registration HOT 7
- antsRegistration_affine_SyN and ants_generate_iterations improvements
- Python environment to run t2star_fit* HOT 2
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