Related Issues (20)
- finish out core genome finding algorithm for linear, circular, and multi-component graphs HOT 1
- Use degree >= 3 nodes for pre-indexing targets HOT 1
- Replace evidence named tuples with nested dictionaries HOT 1
- Stop putting kmer_counts datastructure into the metagraph
- https://julialang.github.io/PackageCompiler.jl/dev/index.html
- Stop running weave on development notebooks for documentation
- Use community detection for seperating out protein communities, genome communities HOT 7
- Use TSV for reading into & out of neo4j HOT 1
- Load host information into neo4j taxonomy db to improve viral filtering HOT 1
- When generating all possible AAmers, drop AAmers that start with stop codon
- get codespace env working again HOT 1
- Get jupyterlab templates working
- add jellyfish counting function HOT 1
- Switch to using static vectors for kmers instead of kmers.jl HOT 1
- Increase storage efficiency of genomes with Aeron's skipmer approach HOT 1
- Finish PoC joint-probility assembler + variant caller by passing my polished graphs into pggb/odgi+vg variant deconvolution flow HOT 2
- CAMI datasets to develop against
- Try dib-lab classification tools HOT 1
- Use conda.jl for downloading and managing containerized 3rd party software HOT 1
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from mycelia.