Groza Cristian's Projects
arXiv LaTeX Cleaner: Easily clean the LaTeX code of your paper to submit to arXiv
Replace FASTA intervals with the sequence of aligned reads from SAM/BAM.
a Bioinformatics Application for Navigating De novo Assembly Graphs Easily
Compute jaccard similarity matrix between colors in a bifrost compacted colored de Bruijn graph.
Biomorph program written in Java that aims to simulate evolution by mutation and natural selection with polygons and a turn function.
Creates summaries of chess games.
Clojure parser for GFA2 format.
Convolutional neural network drug classifer.
CrossMap is a python program to lift over genome coordinates from one genome version to another.
Apt packager interface for emacs.
Spacemacs confguration layer that adds spacemacs style bindings to Emacs' HTML-mode.
Nextflow pipeline for SURVIVOR.
gEcrit is a Python IDE. Its focus is on simplicity and ease of use. It is fast and lightweight. It features Python indentation, line numbers, code folding, syntax highlighting, shell access, code completion, a program runner, a source browser, indentation guides, a white space indicator, autosaving, an edge line, multiple tabs, printing, jumping to a specific line, word searching, word replacement, zooming undo/redo, pastebin.com code submission, Python syntax checking, the ability to change the indentation of many lines at once, autocompletiton,file tree browser,and bad brace checking.
Goodreads API wrapper for Clojure.
GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered polymorphisms in read sets using genome-graphs.
ChIP-seq peak caller for reads mapped to a graph-based reference genome
Haskell regular expresion engine.
Tool for managing Unity Lenses.