Problem size limits exceeded with free edition of CPLEX about carveme

[cdanielmachado]

Hi @lavik17

You are using the demo version, which is not exactly the same as academic license.

You need to sign up for an academic license at IBM and download the fully functional version of cplex. This is free for academics, there is no cost.

[Sububioinfo]

Hi am using academic version cplex_studio1210.linux-x86-64.bin
Still am getting an error

[Sububioinfo]

This is my error
Traceback (most recent call last):
File "/storage/dhome/jsankarasubramani/miniconda3/envs/carveme/bin/carve", line 364, in
ref_score=args.reference_score
File "/storage/dhome/jsankarasubramani/miniconda3/envs/carveme/bin/carve", line 198, in main
debug_output=debug_output)
File "/storage/dhome/jsankarasubramani/miniconda3/envs/carveme/lib/python3.6/site-packages/carveme/reconstruction/carving.py", line 236, in carve_model
ref_reactions=ref_reactions, ref_score=ref_score, debug_output=debug_output)
File "/storage/dhome/jsankarasubramani/miniconda3/envs/carveme/lib/python3.6/site-packages/carveme/reconstruction/carving.py", line 123, in minmax_reduction
solver.update()
File "/storage/dhome/jsankarasubramani/miniconda3/envs/carveme/lib/python3.6/site-packages/framed/solvers/cplex_interface.py", line 206, in update
self.add_variables(var_ids, lbs, ubs, vartypes)
File "/storage/dhome/jsankarasubramani/miniconda3/envs/carveme/lib/python3.6/site-packages/framed/solvers/cplex_interface.py", line 105, in add_variables
self.problem.variables.add(names=var_ids, lb=lbs, ub=ubs, types=vartypes)
File "/storage/dhome/jsankarasubramani/miniconda3/envs/carveme/lib/python3.6/site-packages/cplex/_internal/_subinterfaces.py", line 456, in add
obj, lb, ub, types, names, columns)
File "/storage/dhome/jsankarasubramani/miniconda3/envs/carveme/lib/python3.6/site-packages/cplex/_internal/_baseinterface.py", line 41, in _add_iter
addfun(*args, **kwargs)
File "/storage/dhome/jsankarasubramani/miniconda3/envs/carveme/lib/python3.6/site-packages/cplex/_internal/_subinterfaces.py", line 378, in _add
types, names)
File "/storage/dhome/jsankarasubramani/miniconda3/envs/carveme/lib/python3.6/site-packages/cplex/_internal/_procedural.py", line 967, in newcols
xctype, colname)
File "/storage/dhome/jsankarasubramani/miniconda3/envs/carveme/lib/python3.6/site-packages/cplex/_internal/_pycplex.py", line 1785, in CPXXnewcols
return _pycplex_platform.CPXXnewcols(env, lp, ccnt, py_obj, py_lb, py_ub, xctype, colname)
TypeError: not a list

[cdanielmachado]

Please check #81