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cbreusing's Projects

bathymodiolus_host-symbiont_popgen icon bathymodiolus_host-symbiont_popgen

Scripts for bioinformatic analyses performed in the paper: "Ecological differences among hydrothermal vent symbioses may drive contrasting patterns of symbiont population differentiation"

marine_animal_microbiomes icon marine_animal_microbiomes

Scripts used for analysis of 16S rRNA amplicon and metagenomic data described in the paper: "Composition and metabolic potential of microbiomes associated with mesopelagic animals from Monterey Canyon"

mdbc icon mdbc

Scripts for assembly and annotation of mitogenomes and molecular barcodes for the Mesophotic and Deep Benthic Communities (MDBC) program

provannid_16s_ssu_meta-analysis icon provannid_16s_ssu_meta-analysis

Scripts and files for analysis of 16S amplicon sequences described in the paper: "Global 16S rRNA diversity of provannid snail endosymbionts from Indo-Pacific deep-sea hydrothermal vents"

provannid_host-symbiont_popgen icon provannid_host-symbiont_popgen

Scripts for symbiont pangenome and host transcriptome assemblies and population genomic analyses performed in the paper: "Horizontal transmission enables flexible associations with locally adapted symbiont strains in deep-sea hydrothermal vent symbioses"

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