cancogen-v Goto Github PK

Name: CanCOGeN-V

Type: Organization

Bio: Genome Canada-led genomics initiative to address COVID-19 pandemic

CanCOGeN-V's Projects

covid-19-signal

Files and methodology pertaining to the sequencing and analysis of SARS-CoV-2, causative agent of COVID-19.

COVID-MVP is an interactive heatmap based visualization tool for SARS-CoV-2. It tracks mutations along with their functional impact and prevalence in Variants of Concern and Interest in near-real time. COVID-MVP is developed in collaboration with nf-ncov-voc https://github.com/cidgoh/nf-ncov-voc as back-end genomics workflow.

covizu

Rapid analysis and visualization of coronavirus genome variation

covseq_mcgill

McGill SARS-CoV2 Documentation

irida-plugin-viral-amplicon-consensus-variants

Sequence Analysis Pipeline for the IRIDA Platform for Viral Genomes

ncov-tools

Small collection of tools for performing quality control on coronavirus sequencing data and genomes

nf-ncov-voc

A Nextflow wrapped workflow for generating the mutation profiles of SARS-CoV-2 genomes (Variants of Concern and Variants of Interest). Workflow is developed in collaboration with COVID-MVP (https://github.com/cidgoh/COVID-MVP) which can be used to visualize the mutation profiles and functional annotations.

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