cajal Goto Github PK

21617_data_release

functional data release for animal 21617

8973_data_release

packaging and release of pinky dataset

9161_data_release

packaging and release of basil dataset

at-image

image processing utilties

atlab-docs.github.io

auditory.github.io

avatr

Official implementation of the paper "AvaTr: One-Shot Speaker Extraction with Transformers"

bl3d

Cell segmentation in 3D GCaMP structural recordings

blender_annotations_tool

c2s

A toolbox for inferring spikes from calcium traces.

ca_source_extraction

Matlab implementation of a source extraction and spike inference algorithm for large scale calcium imaging data analysis, based on a constrained matrix factorization approach.

cell_detector

Learning algorithm repository for detecting cells in 2-Photon stacks

dandi_microns_phase3_nda

tutorials for downloading and operating on dandiset for microns minnie volume functional data

databridge

Data Bridge

datajoint-plus

A DataJoint extension that integrates hashes and other features.

datascience-notebook

custom built environment for data analysis

deeplabcut

Markerless tracking of user-defined features with deep learning

deepsqueak

DeepSqueak: A Deep Learning Based System for Quantification of Ultrasonic Vocalizations

djutils

Datajoint Utilities

em

Datajoint schemas for EM anatomical data.

featurevis

Visualize features cells are responsive to via gradient ascent.

foundation

Neuronal recordings and Foundation models

func-conn-notebook

inception_loop2019

Code for Inception Loop 2019 Paper

kubernetesmlexample

labelops

Operates on labeled neuronal meshes.

microns-base

base environment for MICrONS repositories

microns-coregistration

microns functional / EM data coregistration

microns-dashboard

Schemas and notebooks for the MICrONS Jupyterhub Dashboard

microns-manual-proofreading

microns manual proofreading