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btcrabb's Projects

caffe icon caffe

Caffe fork that supports Conditional Random Fields (CRF) and Weight Maps

cap-automated-pipeline icon cap-automated-pipeline

Fully-automated, deep-learning based pipeline to generate biventricular cardiac models from raw cine SSFP MRI images.

cap-automation icon cap-automation

A repository containing tools for automating statistical cardiac modeling in association with the Cardiac Atlas Project.

cmrg-ct2mri icon cmrg-ct2mri

Directions and python scripts for generating CIM-compatible DICOM files from CT images for statistical cardiac modeling.

curriculum-modeling icon curriculum-modeling

In this repository, we will explore the impact of interleaved vs. blocked training schedules on the ability of a multi-task neural network to learn a radiology task. If the neural networks demonstrate results consistent with human learners, it may be possible to simulate curriculum changes and human subject experimentation using machine learning.

gcloss icon gcloss

A PyTorch implementation of the gradient consistency loss function.

nsqip_ml icon nsqip_ml

A repository to develop predictive algorithms for the NSQIP pituitary tumor dataset

slideseg icon slideseg

A Python module that produces image patches and annotation masks from whole slide images for deep learning in digital pathology.

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