Comments (1)
Dupe of #103
from gatk.
Related Issues (20)
- PrintReads introduces N bases when encoding some CRAMs and changes sequence HOT 15
- PostprocessGermlineCNVCalls error HOT 2
- GenotypeGVCFs report java.lang.OutOfMemoryError: Java heap space while call incremental imported GenomicsDB HOT 3
- Prevent users enabling annotations with mismatching data type (flow etc) HOT 7
- VariantAnnotator IndexOutOfBoundsException
- [bug report] CNNScoreVariants can't continue HOT 1
- VCF row validation error on gCNV results HOT 9
- PackagesNotFoundError: The following packages are not available from current channels: HOT 3
- java.lang.IllegalArgumentException: the number of genotypes is too large for ploidy 8 and 55 alleles: approx. 3381098545 HOT 3
- Funcotator - WARN GencodeFuncotationFactory - Cannot create complete funcotation for variant at chr....
- several genes are reported in "PREDICTED_LOF" for a balanced translocation HOT 3
- Docker container should allow use by non-privileged user HOT 2
- Funcotator gnomAD incoherent number of output fields
- CombineGVCFs meet error HOT 2
- Empty BAM after running SplitNCigarReads HOT 4
- Troubleshooting VCF Output Truncation Issue during GATK CombineGVCFs Process HOT 1
- GATK Tutorial#11682 reproduce different results HOT 2
- SoftClippedReadFilter Shows Filtering Result Opposite to Description. HOT 1
- BwaSpark parameter optimization HOT 1
- About DP4 HOT 1
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from gatk.