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Boutroslab's Projects

bookingcal icon bookingcal

Solution for a web-based booking calendar for lab equipment

carpools icon carpools

Exploratory data analysis for pooled CRISPR/Cas9 screens

cld icon cld

A software for the multispecies design of CRISPR/Cas9 libraries

cld_docker icon cld_docker

Docker for CRISPR Library Designer | https://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-0915-2

crispranalyzer icon crispranalyzer

CRISPRAnalyzeR: interactive analysis, annotation and documentation of pooled CRISPR screens

htsvis icon htsvis

A web app for exploratory data analysis of high-throughput screens (HTS)

nextrnai icon nextrnai

nextrnai - a software package for the design of RNAi libraries

supp_bageritz_2023 icon supp_bageritz_2023

Supplemental code for publication "Glyoxal as alternative fixative for single cell transcriptome experiments"

supp_bamberg_2021 icon supp_bamberg_2021

Supplemental materials, scripts and source data regarding the article "Targeting EHMT1/2 sensitizes colorectal cancer to pan-HDAC inhibitors"

supp_heigwer_2021 icon supp_heigwer_2021

The functional analysis of genes provides relevant information to understand cellular function. Further, the mapping of genetic interactions sheds light on how genes act in the emergence of cellular complexity. Here, we present the most extensive genetic interaction and morphological profiling screen in a metazoan cell to date. We profiled 680 000 pairwise RNAi perturbations in more than 38 billion cells and analyzed 73 morphological features by high-throughput imaging.

web-cellhts2 icon web-cellhts2

Repository for the web-cellHTS project (http://www.biomedcentral.com/1471-2105/11/185)

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