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Issue with plotQTLstat about qtlseqr HOT 1 CLOSED

bmansfeld avatar bmansfeld commented on July 28, 2024
Issue with plotQTLstat

from qtlseqr.

Comments (1)

bmansfeld avatar bmansfeld commented on July 28, 2024

Hey Allesandro,
Thanks for the feedback!
I'm guessing the error is due to some formatting of the x axis.. I wasn't anticipating users in yeast or other organisms with smaller genomes (I'm a plant guy).
If you send me your data I could take a look to understand why it breaks the code. I have some ideas but it's hard to be sure with out an example.
In any case you really don't need for me to solve this for you. plotQTLStats is just a wrapper for ggplot and all the data for plotting exists in your data_filt dataframe. So you can reproduce the plots manually using that.
Ben

from qtlseqr.

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