blue-moon22 Goto Github PK

abbey-road-hackathon

atlas-website

Shiny App for Atlas Website

azure-batch-python-example

A Python application that uses Batch to process genomic files in parallel with the SPAdes assembly tool.

camisim

CAMISIM: Simulating metagenomes and microbial communities

cancer-treatment-for-r_wik

Code for WIK workshop

cfg_website

coding101-workshop

Turtle spirals in Python

configs

Config files used to define parameters specific to compute environments at different Institutions

e-mem

E-MEM: efficient computation of maximal exact matches for very large genomes

formulai

LangChain/GPT 3.5 App for generating ingredients and protocols for formulations

gender_pay_gap_hackathon

interproscan_docker

Docker recipe for building Interproscan

is_analysis

isc

Insertion Sequence Catalogue (ISC)

khmer

In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

lido-thesis-rotation

lido-thesis-supplementary-2017

Supplementary Code for Masters Thesis

meetup-presentations_london

R-Ladies London presentations and code snippets demonstrated during meetups

pal-mem

Identifying Reads with Inverted Terminal Repeats from Large Genomes Using Efficient Computation of Maximal Exact Matches

palidis

PaliDIS: A tool for fast discovery of novel insertion sequences

palidis4

Tool to discover novel insertion sequences

palidis_paper_analysis

panstripe

post processing of bacterial pangenome gene presence/absence matrices

plasmidome

raincloudplots

Code and tutorials to visualise your data that is both beautiful *and* statistically valid

resistanceatlas

resistancereport

resistancereportdatacleaning

resistomeanalysis

Resistome Analysis R Package

resistomedata

Data and analysis script for Resistome Analysis