bjreisman Goto Github PK
Name: Benjamin Reisman
Type: User
Company: Johns Hopkins Medicine
Bio: Chemical biologist who likes to code. Resident Physician-Scientist at Johns Hopkins
Twitter: BenjaminReisman
Location: Baltimore, MD
Benjamin Reisman's Projects
2021_ncb_apoptolidin
Code to reproduce figures from Reisman 2021
bjreisman.github.io
cellrouter
Reconstruction of complex single-cell trajectories using CellRouter
cytoml
cytotidyr
Find the cells that bring you joy... and turn them into flat files
debarcoder
For demultiplexing FCB flow cytometry
doubletfinder
R package for detecting doublets in single-cell RNA sequencing data
drc
Fitting dose-response models in R
dynutils
Common dynverse functions
fit-sne
Fast Fourier Transform-accelerated Interpolation-based t-SNE (FIt-SNE)
flowworkspace
flowWorkspace
ggplot2
An implementation of the Grammar of Graphics in R
ggpointdensity
:chart_with_upwards_trend: :bar_chart: Introduces geom_pointdensity(): A Cross Between a Scatter Plot and a 2D Density Plot.
ggrastr
Raster geoms for ggplot2
ggridges
Geoms to make ridgeline plots with ggplot2
git_training
Training repository for Bios301 students
hdf5r
londoncytometry2019
Intro to working with Flow Cytometry Data in R
ngs_mutation_rate_assay
This repository contains scripts that were used during my use of Illumina sequencing to determine mutation rates.
umap_cytof
UMAP analysis of mass-cytometry data.
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