This is a Cytoscape Core App for reading BioPAX files.
git clone https://github.com/cytoscape/biopax.git
mvn clean install
Name: BioPAX
Type: Organization
Bio: BioPAX is a standard language that aims to enable integration, exchange, visualization and analysis of biological pathway data.
Location: North America
Blog: https://www.biopax.org
Core App: BioPAX support
BioPAX site
Online console for trying out BioPAX Paxtools Java API
Deprecated (- moving inside the Paxtools)
The BioPAX Object Model, API and utilities implemented in Java
The package provides a set of R functions for interacting with BioPAX OWL files using Paxtools and the querying Pathway Commons (PC) molecular interaction database
BioPAX specification and examples
The BioPAX Validator
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