bio-mingchen's Projects
A curated list of awesome Bioinformatics libraries and software.
A curated list of awesome Python frameworks, libraries, software and resources
A curated list of awesome reproducible papers in single-cell omics
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib
Config files for my GitHub profile.
Common exercises of bioinformatics mainly about Sequncing tech and data analysis
A tool for semi-automatic cell type annotation
A project for crawling disease information of description by using multithreading and proxy in python3
customized django registration system
This project is to show how to use github to upload your scripts
This project is made for HLA(human leukocyte antigen) analysis
instant coding answers via the command line
Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.
Records of commonly and effectively Linux commands and scripts with active examples
My blog
An innovative algorithmic for single-cell celltype assignment and visualization
(unofficial) Googletrans: Free and Unlimited Google translate API for Python. Translates totally free of charge.
Best practices when using python to basic usage,data science or web building
Tools (written in C using htslib) for manipulating next-generation sequencing data
shortcut tools for scRNA-seq data analysis based on scanpy
Single cell sequencing data analysis algorithms exploration
Pipeline for single cell integration
Module 4 for HKU Single-cell Workshop
Scripts for Somatic variants Calling
A Teaching Engine for Genomics
Collection of bioinformatics training materials