Comments (1)
According to the source code, the warning will be raised if any of the following parameters are not met when arrows=False
:
if use_linecollection and any(
[
arrowstyle is not None,
arrowsize != 10,
connectionstyle != "arc3",
min_source_margin != 0,
min_target_margin != 0,
]
so the solution will have to set all of these back to the default for undirected graphs (i.e. partial diagrams).
Assuming we only use nx.is_directed()
as the switch for handling these cases, that means that we will lose the functionality to generate undirected variants of directed graphs. This is probably "okay" for now since we generally draw undirected graphs with fancy arrows since they are a more accurate representation of the graph. If this is desired for something like a flux diagram, we may have to find a way to specify this manually, possibly by adding a new parameter to draw_diagrams()
, but again this is not something in common use.
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Related Issues (20)
- MAINT: Change plotting function `label`/`path` behavior
- MAINT: Move single cycle/diagram plotting code into new, public plotting function HOT 1
- CI: Update `codecov` configuration HOT 1
- DOC: Purge "directional partial" from function docstrings
- ENH: Change graphs to store rates as edge weights instead of attributes HOT 1
- ENH: Add `KineticModel` method for calculating net cycle fluxes HOT 3
- MAINT: create `KineticDiagram` object and move relevant functions into class body HOT 2
- CI: Add Python 3.10 to CI
- DOC: Add algorithm references to function docstrings HOT 2
- TST: Add test for transition/cycle/operational flux relations HOT 3
- ENH: Improve KDA API HOT 1
- ENH: Add thermodynamic consistency checker
- make a release HOT 10
- CI, BUG: Tests Failing on Python 3.9 HOT 1
- Replace deprecated `np.product()` function calls HOT 1
- TST: Add test which verifies number of spanning trees using Kirchhoff's Matrix-Tree Theorem HOT 3
- MAINT, TST: hypothesis FailedHealthCheck error due to multiple executors
- CI: Update CI Python versions
- MAINT: Pin `mpmath` to version 1.3.0 HOT 1
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