baliga-lab Goto Github PK

3h11_r12_syncom

This repository contains data and code for the manuscript "Emergence and disruption of cooperativity in a denitrifying microbial community"

aqx-lightsensor-neu

aqx_rt_probeware

Project Feed 1010 - Realtime probeware client

aqxandroid

ProjectFeed1010 AQX Android App

aqxandroid-neu

AQX Android application development as part of CS6510 Class

aqxios

ProjectFeed1010 AQX iOS App

aqxios-neu

AQX iOS application development as part of CS6510 Class

aqxweb

ProjectFeed1010 AQX Web App

baliga-lab.github.com

organization page

bwa_pipeline

Genomics pipeline based on Burrows Wheeler Aligment

cancer-mirna-regulatory-network

A database containing the predictions for the Cancer miRNA-Regulatory Network.

central-dogma-api

API for Central Dogma

chlamy_model_icre1355

iCre55 - the home of the most up to date Chlamydomonas reinhardtii genome-scale metabolic model

chromegoose

A Gaggle plugin for Chrome

cm-gene-annotations

Javascript libarary to visualize cmonkey style gene annotations

cmonkey1

Original code for cMonkey as published in 2007.

cmonkey2

Python port of cMonkey, a machine-learning based method for clustering

cmonkeynwinf

Network Inference for cMonkey output based on Inferelator and elastic-net

corem_browser

View GREs by Corem for EGRIN2 models

cygoose

Cytoscape plugin for Gaggle Integration

cytoscape3-app-scala

A starting point for writing Cytoscape 3.x apps in Scala

cytoscape3-bundle-scala

A starting point for writing Cytoscape 3.x OSGi bundle apps in Scala

discovery2014

ENIGMA 2014 Discovery project code

drona_mlsynergy

Algorithms for drug response analysis and prediction of outcome of novel drug interactions

drupal_egrin2

A module that integrates Drupal with the EGRIN2 API

duffy_scripts

Automation scripts for running DuffyNGS based RNA seq analysis

echidna

Experimental CuratIon and Data iNtegration Application

echidna_2.0

egrin2-tools

EGRIN2 tool chain

egrin2api_mtu

An EGRIN2 API implementation on top of a MongoDB storage