Name: Biafra Ahanonu
Type: User
Company: University of California, San Francisco
Bio: Research pain & movement in the brain. Develop computational tools for calcium imaging analysis. PhD (Stanford). BSc (MIT). Old repositories at @gaara42.
Twitter: syscarut
Blog: https://bahanonu.com
bahanonu.github.io
For GitHub pages redirects, etc.
ca_source_extraction
Matlab implementation of a source extraction and spike inference algorithm for large scale calcium imaging data analysis, based on a constrained matrix factorization approach.
cdc_statistics
Downloads and plots CDC statistics.
ciatah
CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: https://git.io/ciatah_docs. Formerly known as calciumImagingAnalysis (ciapkg).
ciatah_utils
File Exchange and related utilities for CIAtah.
cnmf_e
Constrained Nonnegative Matrix Factorization for microEndoscopic data
fsda
Flexible Statistics and Data Analysis (FSDA) extends MATLAB for a robust analysis of data sets affected by different sources of heterogeneity. It is open source software licensed under the European Union Public Licence (EUPL). FSDA is a joint project by the University of Parma and the Joint Research Centre of the European Commission.
geosatview
geoSatView: Downloads satellite data, crop images, and makes animation video.
getoptions
getOptions: clean handling and parsing of variable arguments (varargin) into MATLAB functions.
ggbiplot
A biplot based on ggplot2
gha-loc-badge
Count project Lines of Code & generate a badge for display.
grinjector
Device for injecting gradient-refractive index (GRIN) lens probes into animals.
imaging_tools
A table containing imaging analysis tools for biology, with a focus on calcium imaging.
kbroman.github.io
Karl Broman's website
licenses-for-github
Repository resources for various licenses, with Markdown formatting for inclusion into GitHub's repositories.
matlab_imaging_code
Code related to analyzing calcium imaging videos with Matlab
matlabtoolboxcheck
MATLAB function to check whether native toolboxes have licenses available and are installed.
matnwb
A Matlab interface for reading and writing NWB files
min1pipe
A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.
normcorre
Matlab routines for online non-rigid motion correction of calcium imaging data
patchwarp
Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.
share
Shared scripts/code.
sloc
simple tool to count SLOC (source lines of code)
stanford_hpc_matlab
MATLAB code related to testing and running analysis on Stanford's HPC systems.
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
