b-ummi Goto Github PK
Name: Bioinformatics @ Molecular Microbiology and Infection Unit
Type: Organization
Bio: Script repository
Blog: http://im.fm.ul.pt
Name: Bioinformatics @ Molecular Microbiology and Infection Unit
Type: Organization
Bio: Script repository
Blog: http://im.fm.ul.pt
List of awesome resources for bioinformatics
Download and run INNUca in Campylobacter HTS public available data
BSR-Based Allele Calling Algorithm
Step by step tutorial using chewBBACA with all necessary files and results
chewBBACA Nomenclature Server
Dengue virus genotyping from shotgun and targeted metagenomics - A nextflow pipeline
Repository of Docker images created by UMMI
Set of scripts and instructions to upload sequencing reads to the ENA.
Fast MLST searching and querying
Get fastq files from ENA using Run IDs
INNUENDO quality control of reads, de novo assembly and contigs quality assessment, and possible contamination search
Docker-compose for INNUENDO Platform deployment
INNUENDO Process controller source code wiht integration with Nextflow
Frontend application and REST API for the INNUENDO Platform
ivr locus allele determination from genomic data
LMAS - Last (Meta)Genomic Assembler Standing
Source code for the interactive report of LMAS workflow
catalog for long-read sequencing tools
In silico pathogenic typing directly from raw Illumina reads
Plasmid Atlas - A web interface to browser for plasmids and their associated genes. Visit us at:
A pipeline to run mapping, mash screen and assembly methods for pATLAS.
Generate target-enrichment baits from a set of genome assemblies.
Repository with ProGenViz source code
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.