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abstar

VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.

ads1-notebooks

Copies of notebooks used in the practical sessions for Algorithms for DNA Sequencing

blog

Blog for android-cn, 微信公众号:codekk, 网站:

clonify-python

cs-video-courses

List of Computer Science courses with video lectures.

docs

MiLaboratories public documentation

enabrowsertools

A collection of scripts to assist in the retrieval of data from the ENA Browser

epicpcr

Scripts to parse sequence data from Emulsion, Paired Isolation, and Concatenation PCR

geekbangpython

genomics_script

grp_paper

Code and data used in The Great Repertoire Project

igpipeline

immunarch

🧬 Immunarch by ImmunoMind: R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires

immunedb

ImmuneDB - Efficient analysis and storage of high-throughput B-cell sequence data

immunogenomics

Python scripts for immunogenomic analysis

immunogenomics_script

python or R scripts for immunoglobulin ireptoire analysis

lihang-code

《统计学习方法》的代码实现

list-all-file-names-in-directory

This is a more complex script that creates a list of names for the every files/folder within the directory, this includes sub files/ sub folders, using recursion. Next, the script outputs the list to a text file. The name of the output text file is needed as a parameter. Created and Tested on Windows OS.

mixcr

MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.

pnas_immune_aging

pyir

Immunoglobulin and T-Cell receptor rearrangement software

python-for-text-analysis

If you want to use Python for text analysis, this course is for you!

sars-cov-2-rbd_dms

Deep mutational scanning of the receptor-binding domain of SARS-CoV-2 Spike

splendor

A markdown CSS module that is absolutely splendid.

sra-tools

SRA Tools

thinkstats2

Text and supporting code for Think Stats, 2nd Edition