atakanekiz Goto Github PK

atakanekiz.github.io

belgeler

TRUBA ile ilgili belgeler.

cell_identity_predictor

This is the initial implementation of Cell Identity Predictor algorithm. Please see CIPR_v1 or the upkept repository

cipr

Cluster Identity Predictor

cipr-package

Cluster Identity Predictor (R package implementation)

cipr-shiny

Repository for Shiny implementation of CIPR

cipr_development

Cluster Identity PRedictor: A Shiny/R applet to annotate clusters in single-cell RNAseq experiments

cipr_shiny

Source code for CIPR Shiny app

complete-python-3-bootcamp

Course Files for Complete Python 3 Bootcamp Course on Udemy

ibds_class_notes

Notes I take during class

immuneresistance

This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources of T cell exclusion linked to immunotherapy clinical outcomes".

iztechbiomedicaldatascience-2022

mir155_tcko_b16ova_scseq

Shiny app to visualize single cell RNA sequencing data

science-loft

Science Loft GitHub repository for recreating analyses

scseq_tools

Functions to facilitate SCseq RNA seq data analysis

scseqtools

R package consisting of function wrappers and pipelines to facilitate single cell RNA sequencing data analysis and visualization

tcgex

The Cancer Genome Explorer

tools

Tools for analyzing high throughput and clinical data

uc-r.github.io

Main repository for R programming courses @ University of Cincinnati, courses and tutorials that focus on data wrangling, exploration, visualization, and analysis with R.