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2017-dsgrn-identifyingrobusthysteresisinnetworks

500-ai-machine-learning-deep-learning-computer-vision-nlp-projects-with-code

500 AI Machine learning Deep learning Computer vision NLP Projects with code

andfun-kotlin-sleep-tracker

assessing_diversity_in_multiplex_networks

Assessing Diversity in Multiplex Networks - Codes and Examples

atpbar

Progress bars for threading and multiprocessing tasks on terminal and Jupyter Notebook

autograd

Efficiently computes derivatives of numpy code.

awesome-community-detection

A curated list of community detection research papers with implementations.

awesome-deep-learning

A curated list of awesome Deep Learning tutorials, projects and communities.

awesome-math

A curated list of awesome mathematics resources

awesome-network-analysis

A curated list of awesome network analysis resources.

awesome-network-embedding

A curated list of network embedding techniques.

awesome-python

A curated list of awesome Python frameworks, libraries, software and resources

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

bdl-benchmarks

Bayesian Deep Learning Benchmarks

bdr

Perform bayesian distribution regression

beavr

BEAVR: A Browser-based tool for the Exploration And Visualization of RNAseq data

bioblender21

Blender plugin to process biological data and molecular work.

biotools

A list of useful bioinformatics resources

bipartitesbm-mcmc

C++ implementation of a MCMC sampler for the (microcanonical) SBM

camoco

Camoco is a fully-fledged software package for building co-expression networks and analyzing the overlap interactions among genes.

cana

CANAlization: Control & Redundancy in Boolean Networks

cdlib

Community Discovery Library - (for networkx and igraph)

cello

Genetic circuit design automation

chaipcr

The software behind Chai's open-source Real-Time PCR instrument

choose

A human-friendly and fast alternative to cut and (sometimes) awk

cirgo

claragenomicsanalysis

SDK for GPU accelerated genome assembly and analysis

cluster_ensembles

A package for combining multiple partitions into a consolidated clustering. The combinatorial optimization problem of obtaining such a consensus clustering is reformulated in terms of approximation algorithms for graph or hyper-graph partitioning.

clusterensembles

A Python package for cluster ensembles

clustergrammer-widget

The Clustergrammer interactive Jupyter notebook widget