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Make use of branches about galaxykickstart HOT 10 CLOSED

mvdbeek avatar mvdbeek commented on May 26, 2024
Make use of branches

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Comments (10)

fabiorjvieira avatar fabiorjvieira commented on May 26, 2024

From now on I will work like this. ;). Please test the last version on the artbio dev branch. I tested it in some situations (with a persistent directory out of the default galaxy root dir, without it, with previous data in the persistent directories and without it), but there are many that I can even imagine.

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mvdbeek avatar mvdbeek commented on May 26, 2024

I will do that.
Try to also automate your test-scripts, to be aware of when and why you break things.
This will help you point out which things are not working.

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mvdbeek avatar mvdbeek commented on May 26, 2024

btw, tests are the best documentation you can possiblly write ;)

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drosofff avatar drosofff commented on May 26, 2024

@fabiorjvieira tested the dev branch on aws.
TASK: [postgresql.movedb | Give postgres access to galaxy_database directory chain] ***
<52.23.179.9> ESTABLISH CONNECTION FOR USER: ubuntu
fatal: [52.23.179.9] => One or more undefined variables: 'galaxy_database_items' is undefined

FATAL: all hosts have already failed -- aborting

PLAY RECAP ********************************************************************
to retry, use: --limit @/Users/aligre/galaxy.retry

52.23.179.9 : ok=13 changed=9 unreachable=1 failed=0

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fabiorjvieira avatar fabiorjvieira commented on May 26, 2024

I think it is a logic bug from mine.
@drosofff Did you try to install in with -e "GALAXY_DATABASE='/name_of_a_directory'"?

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drosofff avatar drosofff commented on May 26, 2024

Is it mentioned in a readme file ?

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fabiorjvieira avatar fabiorjvieira commented on May 26, 2024

Branches were created. One for each issue/upgrade in the code.

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drosofff avatar drosofff commented on May 26, 2024

I cannot close this issue without having the here above reported bug fixed

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fabiorjvieira avatar fabiorjvieira commented on May 26, 2024

Could not reproduce this bug. It is still a bug?

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drosofff avatar drosofff commented on May 26, 2024

No it's gone with the dev branch

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