arkadiy-garber Goto Github PK
Type: User
Company: Arizona State University
Bio: Microbiology, bioinformatics, symbioses, oceanography, astrobiology/geobiology.
Location: Tempe, AZ
Type: User
Company: Arizona State University
Bio: Microbiology, bioinformatics, symbioses, oceanography, astrobiology/geobiology.
Location: Tempe, AZ
Site to help biologists wade their way into bioinformatics.
A collection of python and bash scripts for various bioinformatics-related tasks
Lecture and tutorial on wet-lab and in silico approaches to rRNA depletion for RNA seq
Conda recipes for the bioconda channel.
Bioinformatics Tools
Bioinformatics one liners from Ming Tang
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
Two introductory lectures and tutorial on the microbial iron cycle and FeGenie
Learn about how to contribute your own Genie to the MagicCave toolkit
Lesson and tutorial on generating count tables from read-mapping data
Lesson and tutorial on the KEGG database, and annotating with Blast/Ghost/KofamKOALA and KEGGDecoder
Tutorial for the MagicCave toolkit
Lesson and tutorial on generating codon alignments and estimating dN/dS using codeml (PAML)
Tutorial on transcriptome assembly using Trinity
A repo for BVCN transcriptomics lessons
Clustering of gene homologs based on genome coordinates to identify co-occurance of genes within operons and conserved cassettes.
A lightweight software to generate phylogenomic trees from unannotated genomes
HMM-based identification and categorization of iron genes and iron gene operons in genomes and metagenomes
Program for identifying and extracting genes with heme-binding motifs from a genome or metagenome/metatranscriptome assembly
A user-friendly workflow for phylogenomics
Script for converting raw KO-number output from GhostKOALA and BlastKOALA into hierarchically-structured CSV format
HMM-based identification and categorization of genes and operons relevant to chemolithoautotrophic metabolisms
Identification of light-sensing and light-producing genes in various 'omics datasets
Minima is a one-size-fits-all Jekyll theme for writers.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.